Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC27Q2M243 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC27Q2M243 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC27Q2M243 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC27Q2M243 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC27Q2M243 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC27Q2M243 PKD1P1-201ENST00000458669 6805 ntBASIC21.21■□□□□ 0.99
CCDC27Q2M243 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.99
CCDC27Q2M243 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 LINC00628-201ENST00000628516 1289 ntBASIC21.2■□□□□ 0.98
CCDC27Q2M243 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CCDC27Q2M243 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC27Q2M243 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 LINC02447-202ENST00000501888 2146 ntBASIC21.19■□□□□ 0.98
CCDC27Q2M243 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 TSEN15P1-201ENST00000423257 515 ntBASIC21.19■□□□□ 0.98
CCDC27Q2M243 EEF1DP4-201ENST00000446006 880 ntBASIC21.19■□□□□ 0.98
CCDC27Q2M243 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 AC069262.1-201ENST00000539058 672 ntBASIC21.19■□□□□ 0.98
CCDC27Q2M243 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 AL365203.3-201ENST00000609742 2057 ntBASIC21.19■□□□□ 0.98
CCDC27Q2M243 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC27Q2M243 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC27Q2M243 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC27Q2M243 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC27Q2M243 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC27Q2M243 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC27Q2M243 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC27Q2M243 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC27Q2M243 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC27Q2M243 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC27Q2M243 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC27Q2M243 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC27Q2M243 AC011477.6-201ENST00000604980 1927 ntBASIC21.17■□□□□ 0.98
CCDC27Q2M243 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CCDC27Q2M243 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC27Q2M243 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms