Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.89□□□□□ -0.19
SSBP1Q04837 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP1Q04837 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SSBP1Q04837 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 FLJ16779-201ENST00000612722 7638 ntBASIC13.88□□□□□ -0.19
SSBP1Q04837 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.88□□□□□ -0.19
SSBP1Q04837 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.88□□□□□ -0.19
SSBP1Q04837 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.88□□□□□ -0.19
SSBP1Q04837 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.88□□□□□ -0.19
SSBP1Q04837 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SSBP1Q04837 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.88□□□□□ -0.19
SSBP1Q04837 AC087641.1-201ENST00000557561 1021 ntBASIC13.88□□□□□ -0.19
SSBP1Q04837 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.88□□□□□ -0.19
SSBP1Q04837 AC083849.1-201ENST00000615227 514 ntBASIC13.88□□□□□ -0.19
SSBP1Q04837 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 AF228730.7-201ENST00000641842 219 ntBASIC13.88□□□□□ -0.19
SSBP1Q04837 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 AC005089.1-201ENST00000619486 2241 ntBASIC13.88□□□□□ -0.19
SSBP1Q04837 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SSBP1Q04837 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 AC011477.6-201ENST00000604980 1927 ntBASIC13.88□□□□□ -0.19
SSBP1Q04837 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP1Q04837 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 TCAF2P1-201ENST00000291129 2421 ntBASIC13.88□□□□□ -0.19
SSBP1Q04837 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP1Q04837 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.87□□□□□ -0.19
SSBP1Q04837 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 CICP24-201ENST00000605464 2705 ntBASIC13.87□□□□□ -0.19
SSBP1Q04837 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SSBP1Q04837 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SSBP1Q04837 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.87□□□□□ -0.19
SSBP1Q04837 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
SSBP1Q04837 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.87□□□□□ -0.19
SSBP1Q04837 AC011498.5-201ENST00000592027 486 ntBASIC13.87□□□□□ -0.19
SSBP1Q04837 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.87□□□□□ -0.19
SSBP1Q04837 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.87□□□□□ -0.19
SSBP1Q04837 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.87□□□□□ -0.19
SSBP1Q04837 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.87□□□□□ -0.19
SSBP1Q04837 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSBP1Q04837 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SSBP1Q04837 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms