Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.27■□□□□ 0.2
HMGCLP35914 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HMGCLP35914 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.27■□□□□ 0.2
HMGCLP35914 AL596442.2-201ENST00000610240 980 ntBASIC16.27■□□□□ 0.2
HMGCLP35914 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.27■□□□□ 0.2
HMGCLP35914 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.27■□□□□ 0.2
HMGCLP35914 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.27■□□□□ 0.2
HMGCLP35914 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMGCLP35914 DOC2GP-204ENST00000639052 2548 ntBASIC16.27■□□□□ 0.2
HMGCLP35914 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
HMGCLP35914 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HMGCLP35914 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.27■□□□□ 0.19
HMGCLP35914 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.27■□□□□ 0.19
HMGCLP35914 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HMGCLP35914 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGCLP35914 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMGCLP35914 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
HMGCLP35914 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
HMGCLP35914 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.27■□□□□ 0.19
HMGCLP35914 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.27■□□□□ 0.19
HMGCLP35914 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
HMGCLP35914 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HMGCLP35914 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
HMGCLP35914 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.26■□□□□ 0.19
HMGCLP35914 GPS2P2-201ENST00000430745 888 ntBASIC16.26■□□□□ 0.19
HMGCLP35914 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGCLP35914 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HMGCLP35914 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.26■□□□□ 0.19
HMGCLP35914 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGCLP35914 AC027612.4-201ENST00000605371 583 ntBASIC16.26■□□□□ 0.19
HMGCLP35914 AC006538.3-201ENST00000612495 578 ntBASIC16.26■□□□□ 0.19
HMGCLP35914 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGCLP35914 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
HMGCLP35914 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGCLP35914 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGCLP35914 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HMGCLP35914 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCLP35914 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
HMGCLP35914 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.26■□□□□ 0.19
HMGCLP35914 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HMGCLP35914 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCLP35914 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCLP35914 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HMGCLP35914 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 AL513523.2-202ENST00000427283 2040 ntBASIC16.25■□□□□ 0.19
HMGCLP35914 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HMGCLP35914 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGCLP35914 RPS8P6-201ENST00000426177 609 ntBASIC16.25■□□□□ 0.19
HMGCLP35914 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGCLP35914 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGCLP35914 RNA5SP410-201ENST00000516285 106 ntBASIC16.25■□□□□ 0.19
HMGCLP35914 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGCLP35914 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
HMGCLP35914 ALG1L8P-201ENST00000533887 760 ntBASIC16.25■□□□□ 0.19
HMGCLP35914 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCLP35914 RARRES2P9-201ENST00000565168 469 ntBASIC16.25■□□□□ 0.19
HMGCLP35914 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGCLP35914 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCLP35914 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 AP001160.2-201ENST00000596071 487 ntBASIC16.25■□□□□ 0.19
HMGCLP35914 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGCLP35914 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCLP35914 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGCLP35914 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCLP35914 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCLP35914 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGCLP35914 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HMGCLP35914 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCLP35914 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
HMGCLP35914 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms