Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.97■□□□□ 0.79
PDE6BP35913 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6BP35913 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.97■□□□□ 0.79
PDE6BP35913 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PDE6BP35913 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.96■□□□□ 0.79
PDE6BP35913 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PDE6BP35913 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PDE6BP35913 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PDE6BP35913 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.96■□□□□ 0.79
PDE6BP35913 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.96■□□□□ 0.79
PDE6BP35913 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.96■□□□□ 0.79
PDE6BP35913 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.96■□□□□ 0.79
PDE6BP35913 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 RPL13P2-201ENST00000440687 659 ntBASIC19.96■□□□□ 0.79
PDE6BP35913 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.96■□□□□ 0.79
PDE6BP35913 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.96■□□□□ 0.79
PDE6BP35913 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.96■□□□□ 0.79
PDE6BP35913 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.96■□□□□ 0.79
PDE6BP35913 AL359711.2-201ENST00000563105 872 ntBASIC19.96■□□□□ 0.79
PDE6BP35913 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.96■□□□□ 0.79
PDE6BP35913 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.96■□□□□ 0.79
PDE6BP35913 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6BP35913 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PDE6BP35913 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6BP35913 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6BP35913 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.95■□□□□ 0.78
PDE6BP35913 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.95■□□□□ 0.78
PDE6BP35913 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6BP35913 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PDE6BP35913 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PDE6BP35913 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.95■□□□□ 0.78
PDE6BP35913 FAM86LP-201ENST00000478302 853 ntBASIC19.95■□□□□ 0.78
PDE6BP35913 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PDE6BP35913 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.95■□□□□ 0.78
PDE6BP35913 PTP4A1P2-201ENST00000546033 454 ntBASIC19.95■□□□□ 0.78
PDE6BP35913 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.95■□□□□ 0.78
PDE6BP35913 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6BP35913 AC244093.1-201ENST00000610837 814 ntBASIC19.95■□□□□ 0.78
PDE6BP35913 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6BP35913 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6BP35913 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6BP35913 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.95■□□□□ 0.78
PDE6BP35913 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6BP35913 AC006538.1-201ENST00000567905 1585 ntBASIC19.95■□□□□ 0.78
PDE6BP35913 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6BP35913 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6BP35913 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.95■□□□□ 0.78
PDE6BP35913 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PDE6BP35913 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.94■□□□□ 0.78
PDE6BP35913 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PDE6BP35913 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.94■□□□□ 0.78
PDE6BP35913 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.94■□□□□ 0.78
PDE6BP35913 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDE6BP35913 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.94■□□□□ 0.78
PDE6BP35913 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PDE6BP35913 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.94■□□□□ 0.78
PDE6BP35913 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.94■□□□□ 0.78
PDE6BP35913 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.94■□□□□ 0.78
PDE6BP35913 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.94■□□□□ 0.78
PDE6BP35913 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6BP35913 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.94■□□□□ 0.78
PDE6BP35913 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PDE6BP35913 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PDE6BP35913 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.93■□□□□ 0.78
PDE6BP35913 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
PDE6BP35913 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PDE6BP35913 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.93■□□□□ 0.78
PDE6BP35913 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms