Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC010491.1-201ENST00000563101 2797 ntBASIC19.58■□□□□ 0.73
CHGBP05060 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHGBP05060 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHGBP05060 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHGBP05060 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHGBP05060 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHGBP05060 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CHGBP05060 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CHGBP05060 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.58■□□□□ 0.72
CHGBP05060 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.58■□□□□ 0.72
CHGBP05060 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
CHGBP05060 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 AC015911.4-201ENST00000588022 1070 ntBASIC19.58■□□□□ 0.72
CHGBP05060 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CHGBP05060 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.58■□□□□ 0.72
CHGBP05060 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.58■□□□□ 0.72
CHGBP05060 PCDHA1-201ENST00000378133 2726 ntBASIC19.58■□□□□ 0.72
CHGBP05060 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CHGBP05060 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHGBP05060 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.58■□□□□ 0.72
CHGBP05060 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.58■□□□□ 0.72
CHGBP05060 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHGBP05060 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHGBP05060 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHGBP05060 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.57■□□□□ 0.72
CHGBP05060 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 KLF2P3-201ENST00000451977 1087 ntBASIC19.57■□□□□ 0.72
CHGBP05060 AC125807.1-201ENST00000483097 614 ntBASIC19.57■□□□□ 0.72
CHGBP05060 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.57■□□□□ 0.72
CHGBP05060 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.57■□□□□ 0.72
CHGBP05060 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.57■□□□□ 0.72
CHGBP05060 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.57■□□□□ 0.72
CHGBP05060 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.57■□□□□ 0.72
CHGBP05060 SPDYE12P-201ENST00000618416 771 ntBASIC19.57■□□□□ 0.72
CHGBP05060 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.57■□□□□ 0.72
CHGBP05060 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHGBP05060 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHGBP05060 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CHGBP05060 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CHGBP05060 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.57■□□□□ 0.72
CHGBP05060 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHGBP05060 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CHGBP05060 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHGBP05060 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.56■□□□□ 0.72
CHGBP05060 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.56■□□□□ 0.72
CHGBP05060 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.56■□□□□ 0.72
CHGBP05060 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.56■□□□□ 0.72
CHGBP05060 AC105021.1-202ENST00000570572 669 ntBASIC19.56■□□□□ 0.72
CHGBP05060 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.56■□□□□ 0.72
CHGBP05060 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.56■□□□□ 0.72
CHGBP05060 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHGBP05060 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHGBP05060 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms