Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 HAUS4P1-201ENST00000406739 1145 ntBASIC18.89■□□□□ 0.61
CTDNEP1O95476 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 AC079140.1-201ENST00000508039 487 ntBASIC18.89■□□□□ 0.61
CTDNEP1O95476 AC105233.2-201ENST00000523697 349 ntBASIC18.89■□□□□ 0.61
CTDNEP1O95476 AF228730.5-201ENST00000530288 346 ntBASIC18.89■□□□□ 0.61
CTDNEP1O95476 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 SPTSSB-204ENST00000617024 1292 ntBASIC18.89■□□□□ 0.61
CTDNEP1O95476 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDNEP1O95476 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CTDNEP1O95476 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 HTR5BP-201ENST00000430851 1154 ntBASIC18.88■□□□□ 0.61
CTDNEP1O95476 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 AC245100.5-201ENST00000452108 331 ntBASIC18.88■□□□□ 0.61
CTDNEP1O95476 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 AC098859.1-201ENST00000502915 1238 ntBASIC18.88■□□□□ 0.61
CTDNEP1O95476 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 AC026120.1-201ENST00000611536 926 ntBASIC18.88■□□□□ 0.61
CTDNEP1O95476 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CTDNEP1O95476 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDNEP1O95476 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDNEP1O95476 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTDNEP1O95476 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDNEP1O95476 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDNEP1O95476 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDNEP1O95476 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDNEP1O95476 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDNEP1O95476 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDNEP1O95476 AP000842.3-202ENST00000569238 1080 ntBASIC18.87■□□□□ 0.61
CTDNEP1O95476 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.87■□□□□ 0.61
CTDNEP1O95476 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms