Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC27.44■■□□□ 1.98
CUX2O14529 WT1-AS_6.1-201ENST00000614919 121 ntBASIC27.44■■□□□ 1.98
CUX2O14529 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC27.44■■□□□ 1.98
CUX2O14529 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC27.44■■□□□ 1.98
CUX2O14529 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
CUX2O14529 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC27.44■■□□□ 1.98
CUX2O14529 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CUX2O14529 DPM2-202ENST00000373110 738 ntTSL 2 BASIC27.44■■□□□ 1.98
CUX2O14529 MSRA-203ENST00000441698 788 ntTSL 2 BASIC27.44■■□□□ 1.98
CUX2O14529 RN7SL8P-201ENST00000461771 266 ntBASIC27.44■■□□□ 1.98
CUX2O14529 AC024681.1-201ENST00000521917 487 ntBASIC27.44■■□□□ 1.98
CUX2O14529 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC27.44■■□□□ 1.98
CUX2O14529 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC27.44■■□□□ 1.98
CUX2O14529 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC27.44■■□□□ 1.98
CUX2O14529 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC27.44■■□□□ 1.98
CUX2O14529 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC27.44■■□□□ 1.98
CUX2O14529 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
CUX2O14529 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC27.43■■□□□ 1.98
CUX2O14529 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
CUX2O14529 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
CUX2O14529 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC27.43■■□□□ 1.98
CUX2O14529 AC234782.1-201ENST00000451950 919 ntBASIC27.43■■□□□ 1.98
CUX2O14529 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC27.43■■□□□ 1.98
CUX2O14529 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC27.43■■□□□ 1.98
CUX2O14529 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC27.43■■□□□ 1.98
CUX2O14529 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 AL589702.1-201ENST00000641229 1509 ntBASIC27.43■■□□□ 1.98
CUX2O14529 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
CUX2O14529 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
CUX2O14529 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC27.42■■□□□ 1.98
CUX2O14529 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CUX2O14529 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
CUX2O14529 AC008132.1-202ENST00000342005 1389 ntBASIC27.42■■□□□ 1.98
CUX2O14529 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CUX2O14529 AC006277.1-201ENST00000624348 1610 ntBASIC27.42■■□□□ 1.98
CUX2O14529 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC27.42■■□□□ 1.98
CUX2O14529 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CUX2O14529 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
CUX2O14529 AC097065.1-201ENST00000425737 517 ntBASIC27.42■■□□□ 1.98
CUX2O14529 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC27.42■■□□□ 1.98
CUX2O14529 AC010234.1-201ENST00000494599 870 ntBASIC27.42■■□□□ 1.98
CUX2O14529 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC27.42■■□□□ 1.98
CUX2O14529 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC27.42■■□□□ 1.98
CUX2O14529 TUBB8P12-201ENST00000308911 1335 ntBASIC27.42■■□□□ 1.98
CUX2O14529 TUBB7P-202ENST00000428444 1305 ntBASIC27.42■■□□□ 1.98
CUX2O14529 TUBB8P7-204ENST00000567960 1332 ntBASIC27.42■■□□□ 1.98
CUX2O14529 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CUX2O14529 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CUX2O14529 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC27.41■■□□□ 1.98
CUX2O14529 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC27.41■■□□□ 1.98
CUX2O14529 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CUX2O14529 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
CUX2O14529 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CUX2O14529 AC044849.1-201ENST00000519737 1188 ntBASIC27.41■■□□□ 1.98
CUX2O14529 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CUX2O14529 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CUX2O14529 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CUX2O14529 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC27.41■■□□□ 1.98
CUX2O14529 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC27.41■■□□□ 1.98
CUX2O14529 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC27.41■■□□□ 1.98
CUX2O14529 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CUX2O14529 LINC02012-201ENST00000608206 1725 ntBASIC27.41■■□□□ 1.98
CUX2O14529 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
CUX2O14529 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC27.41■■□□□ 1.98
CUX2O14529 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
CUX2O14529 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC27.41■■□□□ 1.98
CUX2O14529 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
CUX2O14529 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CUX2O14529 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
CUX2O14529 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
CUX2O14529 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CUX2O14529 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC27.4■■□□□ 1.98
CUX2O14529 AL008707.1-201ENST00000422498 534 ntBASIC27.4■■□□□ 1.98
CUX2O14529 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CUX2O14529 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC27.4■■□□□ 1.98
CUX2O14529 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC27.4■■□□□ 1.98
CUX2O14529 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC27.4■■□□□ 1.98
CUX2O14529 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
CUX2O14529 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms