Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RPL37AP1-201ENST00000412502 279 ntBASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 SPTLC1P1-201ENST00000447199 261 ntBASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 ZNF890P-202ENST00000530367 1156 ntBASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 BANF1P1-201ENST00000553684 263 ntBASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 AL133215.2-201ENST00000609242 977 ntBASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1G3Q9Y6M4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CSNK1G3Q9Y6M4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.02■□□□□ 0.15
CSNK1G3Q9Y6M4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSNK1G3Q9Y6M4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.02■□□□□ 0.15
CSNK1G3Q9Y6M4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.02■□□□□ 0.15
CSNK1G3Q9Y6M4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.02■□□□□ 0.15
CSNK1G3Q9Y6M4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSNK1G3Q9Y6M4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.02■□□□□ 0.15
CSNK1G3Q9Y6M4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 CROCCP1-201ENST00000426910 5675 ntBASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 AC093724.1-201ENST00000448659 1027 ntBASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 AL079307.3-201ENST00000556114 283 ntBASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 AL844908.2-201ENST00000609461 460 ntBASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 AC025048.6-201ENST00000634326 1161 ntBASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSNK1G3Q9Y6M4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 BTBD7P1-201ENST00000447253 1453 ntBASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 AP005018.1-201ENST00000525475 301 ntBASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 AC009407.1-201ENST00000568958 598 ntBASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16■□□□□ 0.15
CSNK1G3Q9Y6M4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms