Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 AC002056.1-201ENST00000395613 760 ntBASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 PDPK2P-202ENST00000562415 1191 ntBASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 AC068137.2-201ENST00000605408 478 ntBASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 FAM197Y3-203ENST00000618346 717 ntBASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VPS9D1Q9Y2B5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AC026396.1-201ENST00000419388 421 ntBASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AC007967.2-201ENST00000432613 625 ntBASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AC074386.1-202ENST00000463561 864 ntBASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AC018845.2-201ENST00000568326 409 ntBASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AC120114.3-201ENST00000611923 658 ntBASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AC107308.1-201ENST00000615897 301 ntBASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS9D1Q9Y2B5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS9D1Q9Y2B5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS9D1Q9Y2B5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VPS9D1Q9Y2B5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
VPS9D1Q9Y2B5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS9D1Q9Y2B5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 MIR648-201ENST00000385046 94 ntBASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 AL035696.2-201ENST00000407941 709 ntBASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 MED15P5-201ENST00000423150 992 ntBASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 AC007688.1-201ENST00000475592 759 ntBASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 AC112191.1-201ENST00000523689 701 ntBASIC16.33■□□□□ 0.2
VPS9D1Q9Y2B5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms