Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 POU5F1P6-201ENST00000466990 990 ntBASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 AC009407.1-201ENST00000568958 598 ntBASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
DENND2AQ9ULE3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 MIR4321-201ENST00000592276 80 ntBASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 AC020916.1-201ENST00000587762 1774 ntBASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DENND2AQ9ULE3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 SPDYE17-201ENST00000412399 783 ntBASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 AL139010.1-201ENST00000454878 894 ntBASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
DENND2AQ9ULE3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DENND2AQ9ULE3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms