Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 AC009533.2-201ENST00000543664 586 ntBASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 AL355385.1-201ENST00000606123 409 ntBASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 MIR7706-201ENST00000613747 67 ntBASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 PRAL-201ENST00000624952 3286 ntBASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCM2LQ9NUG4 AC069224.1-201ENST00000566372 1715 ntBASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 SIGLEC30P-201ENST00000455569 941 ntBASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 AC055717.3-201ENST00000622967 595 ntBASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.65■□□□□ 0.1
CCM2LQ9NUG4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CCM2LQ9NUG4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.64■□□□□ 0.1
CCM2LQ9NUG4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.64■□□□□ 0.09
CCM2LQ9NUG4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCM2LQ9NUG4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCM2LQ9NUG4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCM2LQ9NUG4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms