Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 GK-202ENST00000378941 458 ntTSL 3 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 SPDYE22P-201ENST00000582158 798 ntBASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 AL662799.1-202ENST00000614205 422 ntBASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 LINC02012-201ENST00000608206 1725 ntBASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 TUBB8P12-201ENST00000308911 1335 ntBASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 TUBB7P-202ENST00000428444 1305 ntBASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 TUBB8P7-204ENST00000567960 1332 ntBASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 AL035456.1-201ENST00000456064 1369 ntBASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TM9SF3Q9HD45 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 AL353705.2-201ENST00000428243 662 ntBASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 AC004233.3-201ENST00000607794 1269 ntBASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 SPTSSB-204ENST00000617024 1292 ntBASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 AC025048.6-201ENST00000634326 1161 ntBASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 AL358472.5-202ENST00000641448 1267 ntBASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM9SF3Q9HD45 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 AC073439.1-201ENST00000624121 1774 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms