Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 POU5F1P6-201ENST00000466990 990 ntBASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 BRI3BPP1-201ENST00000594224 787 ntBASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 AC133539.2-201ENST00000604757 467 ntBASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH11XQ9BZA7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 PDIA3P1-201ENST00000471856 1510 ntBASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 AC005915.1-201ENST00000624912 2018 ntBASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 HLA-A-202ENST00000376806 1854 ntBASIC20.97■□□□□ 0.95
PCDH11XQ9BZA7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 ACTG1P3-201ENST00000431775 1114 ntBASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 CTBP2P5-201ENST00000454986 1264 ntBASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 SLC25A47P1-201ENST00000531577 414 ntBASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDH11XQ9BZA7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
PCDH11XQ9BZA7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PCDH11XQ9BZA7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.95■□□□□ 0.95
PCDH11XQ9BZA7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 AL592424.1-201ENST00000563624 1536 ntBASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDH11XQ9BZA7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms