Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 CETN4P-206ENST00000642099 2168 ntBASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.96■□□□□ 0.3
CDK5RAP1Q96SZ6 UBALD1-205ENST00000590891 2641 ntBASIC16.96■□□□□ 0.3
CDK5RAP1Q96SZ6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDK5RAP1Q96SZ6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDK5RAP1Q96SZ6 AL592424.1-201ENST00000563624 1536 ntBASIC16.96■□□□□ 0.3
CDK5RAP1Q96SZ6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.96■□□□□ 0.3
CDK5RAP1Q96SZ6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDK5RAP1Q96SZ6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
CDK5RAP1Q96SZ6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 ME2P1-201ENST00000426028 1970 ntBASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 AC097493.3-201ENST00000509725 367 ntBASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.95■□□□□ 0.3
CDK5RAP1Q96SZ6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 AL139010.1-201ENST00000454878 894 ntBASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 AL096865.1-201ENST00000606796 927 ntBASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5RAP1Q96SZ6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms