Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 AC097376.2-205ENST00000610159 5334 ntBASIC13.35□□□□□ -0.27
RAB40CQ96S21 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 MYO15B-237ENST00000642007 4893 ntBASIC13.34□□□□□ -0.27
RAB40CQ96S21 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 FAM86EP-206ENST00000510506 987 ntBASIC13.34□□□□□ -0.27
RAB40CQ96S21 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 AC091167.2-201ENST00000579581 588 ntBASIC13.34□□□□□ -0.27
RAB40CQ96S21 AC020765.3-201ENST00000613051 740 ntBASIC13.34□□□□□ -0.27
RAB40CQ96S21 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.34□□□□□ -0.27
RAB40CQ96S21 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 PGM5P2-202ENST00000637225 1043 ntBASIC13.34□□□□□ -0.27
RAB40CQ96S21 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.34□□□□□ -0.27
RAB40CQ96S21 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB40CQ96S21 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB40CQ96S21 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB40CQ96S21 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB40CQ96S21 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms