Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 KRT18P58-201ENST00000527480 1120 ntBASIC16.9■□□□□ 0.3
HDAC11Q96DB2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 AP002472.1-201ENST00000577490 586 ntBASIC16.9■□□□□ 0.3
HDAC11Q96DB2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 AL078644.1-201ENST00000609881 752 ntBASIC16.9■□□□□ 0.3
HDAC11Q96DB2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC11Q96DB2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.89■□□□□ 0.3
HDAC11Q96DB2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.89■□□□□ 0.3
HDAC11Q96DB2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HDAC11Q96DB2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 MIR574-201ENST00000385209 96 ntBASIC16.89■□□□□ 0.29
HDAC11Q96DB2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 KRT18P34-201ENST00000488218 1270 ntBASIC16.89■□□□□ 0.29
HDAC11Q96DB2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 AC006449.6-201ENST00000612330 2296 ntBASIC16.89■□□□□ 0.29
HDAC11Q96DB2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC11Q96DB2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 AC016027.1-202ENST00000607927 1699 ntBASIC16.88■□□□□ 0.29
HDAC11Q96DB2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 AC018695.7-201ENST00000624587 2492 ntBASIC16.88■□□□□ 0.29
HDAC11Q96DB2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 AC002056.1-201ENST00000395613 760 ntBASIC16.88■□□□□ 0.29
HDAC11Q96DB2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 AC040169.1-201ENST00000565382 521 ntBASIC16.88■□□□□ 0.29
HDAC11Q96DB2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 AL161645.1-201ENST00000622716 1255 ntBASIC16.88■□□□□ 0.29
HDAC11Q96DB2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC11Q96DB2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms