Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 ACA64.2-201ENST00000459014 129 ntBASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 AC044860.1-202ENST00000559481 777 ntBASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 CHCHD2P3-201ENST00000603038 451 ntBASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SYNPOQ8N3V7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPOQ8N3V7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.58■□□□□ 0.25
SYNPOQ8N3V7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPOQ8N3V7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPOQ8N3V7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPOQ8N3V7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPOQ8N3V7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPOQ8N3V7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPOQ8N3V7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SYNPOQ8N3V7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 AC132938.2-201ENST00000579188 680 ntBASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 SRD5A3P1-201ENST00000603021 949 ntBASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 AC020765.3-201ENST00000613051 740 ntBASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 AL591163.1-201ENST00000641757 987 ntBASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SYNPOQ8N3V7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 AL671710.1-201ENST00000610245 2349 ntBASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 RPS2P32-201ENST00000439199 892 ntBASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 AC093724.1-201ENST00000448659 1027 ntBASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 KRT17P8-201ENST00000540749 863 ntBASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 RAB43P1-201ENST00000561790 589 ntBASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 MIR6069-201ENST00000620069 79 ntBASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 AC007431.3-201ENST00000623221 587 ntBASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms