Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 AC106794.1-201ENST00000506935 792 ntBASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 IGLV3-15-201ENST00000518356 244 ntBASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 MIR4649-201ENST00000582839 64 ntBASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 AC012044.1-201ENST00000603431 297 ntBASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC22.13■■□□□ 1.13
LTBP4Q8N2S1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 AL512652.2-201ENST00000625156 1716 ntBASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 AL353637.1-201ENST00000451571 732 ntBASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 AC005740.2-201ENST00000511085 419 ntBASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 GPAA1P2-202ENST00000606848 1787 ntBASIC22.12■■□□□ 1.13
LTBP4Q8N2S1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 AL512430.1-201ENST00000392575 860 ntBASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 ALG1L13P-202ENST00000519320 584 ntBASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 NEU3-205ENST00000531619 582 ntTSL 5 BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 AL355312.1-201ENST00000407115 2176 ntBASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 AC016396.2-201ENST00000562575 1417 ntBASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
LTBP4Q8N2S1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 AC004987.2-201ENST00000395959 1148 ntBASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 RPL18P13-201ENST00000478088 569 ntBASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 AC124947.2-201ENST00000547118 1133 ntBASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 AL121723.1-201ENST00000445194 1519 ntBASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC22.1■■□□□ 1.13
LTBP4Q8N2S1 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 PIN4P1-201ENST00000451079 396 ntBASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 KRT18P43-201ENST00000469825 1281 ntBASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 SYT17-208ENST00000568433 812 ntTSL 3 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LTBP4Q8N2S1 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms