Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 AL079307.3-201ENST00000556114 283 ntBASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 TEX28P1-201ENST00000613479 1221 ntBASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 TEX28P2-201ENST00000617764 1221 ntBASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 ME2P1-201ENST00000426028 1970 ntBASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.17■□□□□ 0.5
SWSAP1Q6NVH7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 MIR661-201ENST00000384842 89 ntBASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 AL365330.1-201ENST00000607459 531 ntBASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms