Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC1P35251 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.31■□□□□ 0.36
RFC1P35251 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RFC1P35251 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFC1P35251 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFC1P35251 AC023274.1-201ENST00000418278 595 ntBASIC17.31■□□□□ 0.36
RFC1P35251 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC1P35251 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.31■□□□□ 0.36
RFC1P35251 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.31■□□□□ 0.36
RFC1P35251 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC1P35251 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.31■□□□□ 0.36
RFC1P35251 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.31■□□□□ 0.36
RFC1P35251 AC068137.2-201ENST00000605408 478 ntBASIC17.31■□□□□ 0.36
RFC1P35251 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.31■□□□□ 0.36
RFC1P35251 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RFC1P35251 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC1P35251 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC1P35251 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.31■□□□□ 0.36
RFC1P35251 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFC1P35251 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFC1P35251 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RFC1P35251 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RFC1P35251 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFC1P35251 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFC1P35251 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.31■□□□□ 0.36
RFC1P35251 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC1P35251 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RFC1P35251 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.3■□□□□ 0.36
RFC1P35251 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.3■□□□□ 0.36
RFC1P35251 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 AL513523.2-202ENST00000427283 2040 ntBASIC17.3■□□□□ 0.36
RFC1P35251 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RFC1P35251 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RFC1P35251 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RFC1P35251 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.3■□□□□ 0.36
RFC1P35251 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.3■□□□□ 0.36
RFC1P35251 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.3■□□□□ 0.36
RFC1P35251 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.3■□□□□ 0.36
RFC1P35251 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.3■□□□□ 0.36
RFC1P35251 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RFC1P35251 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.3■□□□□ 0.36
RFC1P35251 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
RFC1P35251 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.3■□□□□ 0.36
RFC1P35251 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
RFC1P35251 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.3■□□□□ 0.36
RFC1P35251 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC1P35251 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 AC016027.1-202ENST00000607927 1699 ntBASIC17.29■□□□□ 0.36
RFC1P35251 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RFC1P35251 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.29■□□□□ 0.36
RFC1P35251 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RFC1P35251 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
RFC1P35251 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.29■□□□□ 0.36
RFC1P35251 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RFC1P35251 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.29■□□□□ 0.36
RFC1P35251 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.29■□□□□ 0.36
RFC1P35251 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.29■□□□□ 0.36
RFC1P35251 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.29■□□□□ 0.36
RFC1P35251 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.29■□□□□ 0.36
RFC1P35251 AL078644.1-201ENST00000609881 752 ntBASIC17.29■□□□□ 0.36
RFC1P35251 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.29■□□□□ 0.36
RFC1P35251 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RFC1P35251 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms