Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UPK1BO75841 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.31□□□□□ -0.12
UPK1BO75841 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 AL355802.2-201ENST00000402069 882 ntBASIC14.31□□□□□ -0.12
UPK1BO75841 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UPK1BO75841 AP003097.1-201ENST00000530657 1135 ntBASIC14.31□□□□□ -0.12
UPK1BO75841 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK1BO75841 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.31□□□□□ -0.12
UPK1BO75841 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.31□□□□□ -0.12
UPK1BO75841 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.31□□□□□ -0.12
UPK1BO75841 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.31□□□□□ -0.12
UPK1BO75841 AC073912.3-201ENST00000624414 853 ntBASIC14.31□□□□□ -0.12
UPK1BO75841 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK1BO75841 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.31□□□□□ -0.12
UPK1BO75841 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UPK1BO75841 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
UPK1BO75841 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UPK1BO75841 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.31□□□□□ -0.12
UPK1BO75841 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
UPK1BO75841 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
UPK1BO75841 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
UPK1BO75841 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UPK1BO75841 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.31□□□□□ -0.12
UPK1BO75841 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UPK1BO75841 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 AC105250.1-201ENST00000509378 2057 ntBASIC14.3□□□□□ -0.12
UPK1BO75841 AC008677.1-201ENST00000519230 1561 ntBASIC14.3□□□□□ -0.12
UPK1BO75841 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UPK1BO75841 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK1BO75841 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.3□□□□□ -0.12
UPK1BO75841 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
UPK1BO75841 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UPK1BO75841 AC140479.7-201ENST00000636301 2332 ntBASIC14.3□□□□□ -0.12
UPK1BO75841 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK1BO75841 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UPK1BO75841 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UPK1BO75841 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UPK1BO75841 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK1BO75841 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.3□□□□□ -0.12
UPK1BO75841 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
UPK1BO75841 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.3□□□□□ -0.12
UPK1BO75841 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.3□□□□□ -0.12
UPK1BO75841 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK1BO75841 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 KRT8P10-201ENST00000450021 1447 ntBASIC14.3□□□□□ -0.12
UPK1BO75841 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UPK1BO75841 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK1BO75841 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 AL122018.1-201ENST00000446607 2310 ntBASIC14.3□□□□□ -0.12
UPK1BO75841 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.3□□□□□ -0.12
UPK1BO75841 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UPK1BO75841 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1BO75841 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1BO75841 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1BO75841 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 AC092127.1-201ENST00000567093 3455 ntBASIC14.29□□□□□ -0.12
UPK1BO75841 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.29□□□□□ -0.12
UPK1BO75841 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
UPK1BO75841 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms