Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.51■□□□□ 0.23
GPC4O75487 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
GPC4O75487 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
GPC4O75487 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.5■□□□□ 0.23
GPC4O75487 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.5■□□□□ 0.23
GPC4O75487 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GPC4O75487 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.5■□□□□ 0.23
GPC4O75487 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
GPC4O75487 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
GPC4O75487 HCG4-201ENST00000418983 998 ntBASIC16.5■□□□□ 0.23
GPC4O75487 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.5■□□□□ 0.23
GPC4O75487 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.5■□□□□ 0.23
GPC4O75487 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.5■□□□□ 0.23
GPC4O75487 AC064836.3-201ENST00000607928 673 ntBASIC16.5■□□□□ 0.23
GPC4O75487 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.5■□□□□ 0.23
GPC4O75487 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
GPC4O75487 SNX33P1-201ENST00000592116 1762 ntBASIC16.5■□□□□ 0.23
GPC4O75487 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.5■□□□□ 0.23
GPC4O75487 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GPC4O75487 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.5■□□□□ 0.23
GPC4O75487 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.5■□□□□ 0.23
GPC4O75487 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GPC4O75487 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GPC4O75487 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.5■□□□□ 0.23
GPC4O75487 AC022188.1-201ENST00000620960 1664 ntBASIC16.5■□□□□ 0.23
GPC4O75487 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
GPC4O75487 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.49■□□□□ 0.23
GPC4O75487 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 ALOX12P2-203ENST00000570921 1945 ntBASIC16.49■□□□□ 0.23
GPC4O75487 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
GPC4O75487 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
GPC4O75487 KRT18P2-201ENST00000447938 1258 ntBASIC16.49■□□□□ 0.23
GPC4O75487 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.49■□□□□ 0.23
GPC4O75487 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 AC087641.1-201ENST00000557561 1021 ntBASIC16.49■□□□□ 0.23
GPC4O75487 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.49■□□□□ 0.23
GPC4O75487 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 AC010507.1-201ENST00000633895 436 ntBASIC16.49■□□□□ 0.23
GPC4O75487 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
GPC4O75487 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
GPC4O75487 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.49■□□□□ 0.23
GPC4O75487 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GPC4O75487 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.48■□□□□ 0.23
GPC4O75487 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GPC4O75487 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GPC4O75487 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.48■□□□□ 0.23
GPC4O75487 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms