Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNND1O60716 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CTNND1O60716 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.03■□□□□ 0.64
CTNND1O60716 MYCLP2-201ENST00000449268 967 ntBASIC19.03■□□□□ 0.64
CTNND1O60716 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CTNND1O60716 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 AL589987.1-201ENST00000453380 819 ntBASIC19.03■□□□□ 0.64
CTNND1O60716 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.03■□□□□ 0.64
CTNND1O60716 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.03■□□□□ 0.64
CTNND1O60716 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
CTNND1O60716 AC092337.1-201ENST00000568699 1129 ntBASIC19.03■□□□□ 0.64
CTNND1O60716 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.03■□□□□ 0.64
CTNND1O60716 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.03■□□□□ 0.64
CTNND1O60716 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CTNND1O60716 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNND1O60716 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNND1O60716 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNND1O60716 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CTNND1O60716 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.02■□□□□ 0.64
CTNND1O60716 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.02■□□□□ 0.64
CTNND1O60716 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.02■□□□□ 0.64
CTNND1O60716 FO393414.2-201ENST00000405153 598 ntBASIC19.02■□□□□ 0.64
CTNND1O60716 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.02■□□□□ 0.64
CTNND1O60716 HLA-V-201ENST00000429037 534 ntBASIC19.02■□□□□ 0.64
CTNND1O60716 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.02■□□□□ 0.64
CTNND1O60716 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTNND1O60716 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.02■□□□□ 0.64
CTNND1O60716 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.02■□□□□ 0.64
CTNND1O60716 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.02■□□□□ 0.64
CTNND1O60716 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.02■□□□□ 0.64
CTNND1O60716 AL365330.1-201ENST00000607459 531 ntBASIC19.02■□□□□ 0.64
CTNND1O60716 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.02■□□□□ 0.64
CTNND1O60716 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTNND1O60716 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CTNND1O60716 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTNND1O60716 AC005622.1-201ENST00000636801 1703 ntBASIC19.02■□□□□ 0.63
CTNND1O60716 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTNND1O60716 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTNND1O60716 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTNND1O60716 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.01■□□□□ 0.63
CTNND1O60716 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.01■□□□□ 0.63
CTNND1O60716 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CTNND1O60716 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.01■□□□□ 0.63
CTNND1O60716 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 LINC01144-201ENST00000626198 1710 ntBASIC19.01■□□□□ 0.63
CTNND1O60716 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.01■□□□□ 0.63
CTNND1O60716 AC079776.1-201ENST00000401540 1152 ntBASIC19.01■□□□□ 0.63
CTNND1O60716 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.01■□□□□ 0.63
CTNND1O60716 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.01■□□□□ 0.63
CTNND1O60716 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.01■□□□□ 0.63
CTNND1O60716 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.01■□□□□ 0.63
CTNND1O60716 MIR4321-201ENST00000592276 80 ntBASIC19.01■□□□□ 0.63
CTNND1O60716 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.01■□□□□ 0.63
CTNND1O60716 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CTNND1O60716 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNND1O60716 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms