Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SRGAP3O43295 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRGAP3O43295 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.3■□□□□ 0.84
SRGAP3O43295 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.3■□□□□ 0.84
SRGAP3O43295 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.3■□□□□ 0.84
SRGAP3O43295 AC069262.1-201ENST00000539058 672 ntBASIC20.3■□□□□ 0.84
SRGAP3O43295 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.3■□□□□ 0.84
SRGAP3O43295 AC061975.2-201ENST00000581722 295 ntBASIC20.3■□□□□ 0.84
SRGAP3O43295 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.3■□□□□ 0.84
SRGAP3O43295 AC018529.1-201ENST00000613063 361 ntBASIC20.3■□□□□ 0.84
SRGAP3O43295 MIR6080-201ENST00000617359 66 ntBASIC20.3■□□□□ 0.84
SRGAP3O43295 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRGAP3O43295 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.3■□□□□ 0.84
SRGAP3O43295 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.3■□□□□ 0.84
SRGAP3O43295 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRGAP3O43295 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.29■□□□□ 0.84
SRGAP3O43295 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.29■□□□□ 0.84
SRGAP3O43295 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SRGAP3O43295 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.29■□□□□ 0.84
SRGAP3O43295 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.29■□□□□ 0.84
SRGAP3O43295 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.29■□□□□ 0.84
SRGAP3O43295 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.29■□□□□ 0.84
SRGAP3O43295 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.29■□□□□ 0.84
SRGAP3O43295 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.29■□□□□ 0.84
SRGAP3O43295 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.29■□□□□ 0.84
SRGAP3O43295 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.29■□□□□ 0.84
SRGAP3O43295 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.29■□□□□ 0.84
SRGAP3O43295 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
SRGAP3O43295 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.29■□□□□ 0.84
SRGAP3O43295 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
SRGAP3O43295 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SRGAP3O43295 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SRGAP3O43295 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.29■□□□□ 0.84
SRGAP3O43295 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.29■□□□□ 0.84
SRGAP3O43295 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRGAP3O43295 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.28■□□□□ 0.84
SRGAP3O43295 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SRGAP3O43295 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SRGAP3O43295 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SRGAP3O43295 AC006449.6-201ENST00000612330 2296 ntBASIC20.28■□□□□ 0.84
SRGAP3O43295 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SRGAP3O43295 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SRGAP3O43295 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SRGAP3O43295 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SRGAP3O43295 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SRGAP3O43295 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.28■□□□□ 0.84
SRGAP3O43295 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.28■□□□□ 0.84
SRGAP3O43295 MIR4453-201ENST00000584019 89 ntBASIC20.28■□□□□ 0.84
SRGAP3O43295 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.28■□□□□ 0.84
SRGAP3O43295 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.28■□□□□ 0.84
SRGAP3O43295 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.28■□□□□ 0.84
SRGAP3O43295 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.28■□□□□ 0.84
SRGAP3O43295 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.28■□□□□ 0.84
SRGAP3O43295 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.28■□□□□ 0.84
SRGAP3O43295 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SRGAP3O43295 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRGAP3O43295 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRGAP3O43295 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.27■□□□□ 0.84
SRGAP3O43295 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRGAP3O43295 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
SRGAP3O43295 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRGAP3O43295 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.27■□□□□ 0.84
SRGAP3O43295 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRGAP3O43295 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.27■□□□□ 0.84
SRGAP3O43295 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRGAP3O43295 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
SRGAP3O43295 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRGAP3O43295 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.27■□□□□ 0.84
SRGAP3O43295 SPDYE7P-202ENST00000420373 878 ntBASIC20.27■□□□□ 0.84
SRGAP3O43295 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.27■□□□□ 0.84
SRGAP3O43295 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SRGAP3O43295 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms