Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
LRFN1Q9P244 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 AC006538.1-201ENST00000567905 1585 ntBASIC15.06■□□□□ 0
LRFN1Q9P244 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
LRFN1Q9P244 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRFN1Q9P244 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.06■□□□□ 0
LRFN1Q9P244 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.05■□□□□ 0
LRFN1Q9P244 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.05■□□□□ 0
LRFN1Q9P244 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
LRFN1Q9P244 AC011270.2-201ENST00000624293 2550 ntBASIC15.05■□□□□ 0
LRFN1Q9P244 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.05■□□□□ 0
LRFN1Q9P244 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
LRFN1Q9P244 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LRFN1Q9P244 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.05■□□□□ -0
LRFN1Q9P244 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.05■□□□□ -0
LRFN1Q9P244 HLA-J-202ENST00000469281 1241 ntBASIC15.05■□□□□ -0
LRFN1Q9P244 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.05■□□□□ -0
LRFN1Q9P244 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.05■□□□□ -0
LRFN1Q9P244 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.05■□□□□ -0
LRFN1Q9P244 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.05■□□□□ -0
LRFN1Q9P244 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
LRFN1Q9P244 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.05■□□□□ -0
LRFN1Q9P244 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.05■□□□□ -0
LRFN1Q9P244 AC105020.1-201ENST00000435356 2205 ntBASIC15.05■□□□□ -0
LRFN1Q9P244 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.05■□□□□ -0
LRFN1Q9P244 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
LRFN1Q9P244 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRFN1Q9P244 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LRFN1Q9P244 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 AL139384.1-201ENST00000612143 3047 ntBASIC15.04■□□□□ -0
LRFN1Q9P244 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.04■□□□□ -0
LRFN1Q9P244 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LRFN1Q9P244 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.04■□□□□ -0
LRFN1Q9P244 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LRFN1Q9P244 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 AL035456.1-201ENST00000456064 1369 ntBASIC15.04■□□□□ -0
LRFN1Q9P244 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.04■□□□□ -0
LRFN1Q9P244 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 AL035633.1-201ENST00000406139 838 ntBASIC15.04■□□□□ -0
LRFN1Q9P244 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.04■□□□□ -0
LRFN1Q9P244 AC092580.3-201ENST00000430932 139 ntBASIC15.04■□□□□ -0
LRFN1Q9P244 AC241585.1-201ENST00000433527 519 ntBASIC15.04■□□□□ -0
LRFN1Q9P244 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.04■□□□□ -0
LRFN1Q9P244 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.04■□□□□ -0
LRFN1Q9P244 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.04■□□□□ -0
LRFN1Q9P244 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.04■□□□□ -0
LRFN1Q9P244 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.04■□□□□ -0
LRFN1Q9P244 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.04■□□□□ -0
LRFN1Q9P244 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.04■□□□□ -0
LRFN1Q9P244 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LRFN1Q9P244 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRFN1Q9P244 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LRFN1Q9P244 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRFN1Q9P244 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRFN1Q9P244 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRFN1Q9P244 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms