Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.62■□□□□ 0.73
SALL1Q9NSC2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 POU5F1P6-201ENST00000466990 990 ntBASIC19.62■□□□□ 0.73
SALL1Q9NSC2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 AC239800.4-201ENST00000603712 296 ntBASIC19.62■□□□□ 0.73
SALL1Q9NSC2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SALL1Q9NSC2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 AC006449.5-201ENST00000610658 2098 ntBASIC19.61■□□□□ 0.73
SALL1Q9NSC2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 AC012645.4-201ENST00000610691 1061 ntBASIC19.61■□□□□ 0.73
SALL1Q9NSC2 AL662799.1-202ENST00000614205 422 ntBASIC19.61■□□□□ 0.73
SALL1Q9NSC2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.61■□□□□ 0.73
SALL1Q9NSC2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.6■□□□□ 0.73
SALL1Q9NSC2 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.6■□□□□ 0.73
SALL1Q9NSC2 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.6■□□□□ 0.73
SALL1Q9NSC2 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.6■□□□□ 0.73
SALL1Q9NSC2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 AL033527.5-202ENST00000641632 1098 ntBASIC19.6■□□□□ 0.73
SALL1Q9NSC2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SALL1Q9NSC2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 AC114501.2-201ENST00000439631 535 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms