Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 AL592309.1-201ENST00000443127 649 ntBASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 AP000344.2-201ENST00000512987 629 ntBASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 AC022145.2-201ENST00000598203 171 ntBASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 AL513210.1-201ENST00000629608 234 ntBASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.63■□□□□ 0.25
POLR1EQ9GZS1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 PCDH8P1-201ENST00000428983 2773 ntBASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 MIR1233-2-201ENST00000408138 82 ntBASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 MIR1233-1-201ENST00000408722 82 ntBASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
POLR1EQ9GZS1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 AL589702.1-201ENST00000641229 1509 ntBASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms