Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC006538.1-201ENST00000567905 1585 ntBASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 KRT43P-201ENST00000434019 910 ntBASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 AC018665.1-201ENST00000622927 1362 ntBASIC19.7■□□□□ 0.74
RTFDC1Q9BY42 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 AC005915.1-201ENST00000624912 2018 ntBASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 AL442647.2-201ENST00000429864 857 ntBASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 EEF1DP4-201ENST00000446006 880 ntBASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 AL583810.1-201ENST00000553344 1045 ntBASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.69■□□□□ 0.74
RTFDC1Q9BY42 AC005332.8-201ENST00000622750 2735 ntBASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 ACTBP11-201ENST00000436287 1126 ntBASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 RPL13P2-201ENST00000440687 659 ntBASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 SLC25A47P1-201ENST00000531577 414 ntBASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 MIR4538-201ENST00000581377 78 ntBASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 LINC01115-203ENST00000606068 577 ntBASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RTFDC1Q9BY42 FZD10-202ENST00000539839 3282 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms