Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 USP32P1-208ENST00000506594 1164 ntBASIC16.61■□□□□ 0.25
PHOX2BQ99453 AC023310.3-201ENST00000557027 670 ntBASIC16.61■□□□□ 0.25
PHOX2BQ99453 AC100756.1-201ENST00000562736 682 ntBASIC16.61■□□□□ 0.25
PHOX2BQ99453 AC138749.3-201ENST00000567691 622 ntBASIC16.61■□□□□ 0.25
PHOX2BQ99453 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 AC116165.1-201ENST00000611806 668 ntBASIC16.61■□□□□ 0.25
PHOX2BQ99453 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 AC008894.3-201ENST00000624324 3103 ntBASIC16.61■□□□□ 0.25
PHOX2BQ99453 AL135999.2-201ENST00000622438 1686 ntBASIC16.61■□□□□ 0.25
PHOX2BQ99453 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PHOX2BQ99453 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHOX2BQ99453 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 BX276092.7-203ENST00000637198 1536 ntBASIC16.6■□□□□ 0.25
PHOX2BQ99453 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 KRT43P-201ENST00000434019 910 ntBASIC16.6■□□□□ 0.25
PHOX2BQ99453 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 AC015936.2-201ENST00000593177 259 ntBASIC16.6■□□□□ 0.25
PHOX2BQ99453 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 AC046158.3-201ENST00000624947 2558 ntBASIC16.6■□□□□ 0.25
PHOX2BQ99453 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHOX2BQ99453 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PHOX2BQ99453 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 AC009949.1-201ENST00000623048 1830 ntBASIC16.59■□□□□ 0.25
PHOX2BQ99453 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms