Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.18■□□□□ 0.02
CNOT9Q92600 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 AL590627.1-203ENST00000421194 1026 ntBASIC15.18■□□□□ 0.02
CNOT9Q92600 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.18■□□□□ 0.02
CNOT9Q92600 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.18■□□□□ 0.02
CNOT9Q92600 POU5F1P6-201ENST00000466990 990 ntBASIC15.18■□□□□ 0.02
CNOT9Q92600 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.18■□□□□ 0.02
CNOT9Q92600 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CNOT9Q92600 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.18■□□□□ 0.02
CNOT9Q92600 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.18■□□□□ 0.02
CNOT9Q92600 AC023141.13-201ENST00000604991 943 ntBASIC15.18■□□□□ 0.02
CNOT9Q92600 AC021097.1-201ENST00000607902 574 ntBASIC15.18■□□□□ 0.02
CNOT9Q92600 AC064836.3-201ENST00000607928 673 ntBASIC15.18■□□□□ 0.02
CNOT9Q92600 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.18■□□□□ 0.02
CNOT9Q92600 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CNOT9Q92600 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
CNOT9Q92600 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CNOT9Q92600 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 AL596087.1-201ENST00000400979 1969 ntBASIC15.18■□□□□ 0.02
CNOT9Q92600 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.18■□□□□ 0.02
CNOT9Q92600 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.18■□□□□ 0.02
CNOT9Q92600 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.18■□□□□ 0.02
CNOT9Q92600 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNOT9Q92600 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CNOT9Q92600 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CNOT9Q92600 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CNOT9Q92600 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CNOT9Q92600 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 REXO1L8P-201ENST00000604378 1897 ntBASIC15.17■□□□□ 0.02
CNOT9Q92600 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.17■□□□□ 0.02
CNOT9Q92600 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
CNOT9Q92600 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 PMS2P4-201ENST00000412466 1052 ntBASIC15.17■□□□□ 0.02
CNOT9Q92600 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.17■□□□□ 0.02
CNOT9Q92600 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.17■□□□□ 0.02
CNOT9Q92600 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.17■□□□□ 0.02
CNOT9Q92600 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.17■□□□□ 0.02
CNOT9Q92600 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
CNOT9Q92600 SLC25A1P1-201ENST00000528351 927 ntBASIC15.17■□□□□ 0.02
CNOT9Q92600 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.17■□□□□ 0.02
CNOT9Q92600 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.17■□□□□ 0.02
CNOT9Q92600 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CNOT9Q92600 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CNOT9Q92600 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.17■□□□□ 0.02
CNOT9Q92600 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CNOT9Q92600 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.17■□□□□ 0.02
CNOT9Q92600 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.17■□□□□ 0.02
CNOT9Q92600 AC004877.2-201ENST00000623941 599 ntBASIC15.17■□□□□ 0.02
CNOT9Q92600 AC007064.4-201ENST00000637740 555 ntBASIC15.17■□□□□ 0.02
CNOT9Q92600 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.17■□□□□ 0.02
CNOT9Q92600 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.17■□□□□ 0.02
CNOT9Q92600 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.17■□□□□ 0.02
CNOT9Q92600 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.17■□□□□ 0.02
CNOT9Q92600 AC025580.3-201ENST00000617932 1424 ntBASIC15.17■□□□□ 0.02
CNOT9Q92600 AC006449.6-201ENST00000612330 2296 ntBASIC15.17■□□□□ 0.02
CNOT9Q92600 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNOT9Q92600 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms