Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.44■□□□□ 0.38
DDX1Q92499 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX1Q92499 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DDX1Q92499 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX1Q92499 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.44■□□□□ 0.38
DDX1Q92499 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
DDX1Q92499 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX1Q92499 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
DDX1Q92499 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
DDX1Q92499 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX1Q92499 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX1Q92499 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX1Q92499 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX1Q92499 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DDX1Q92499 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DDX1Q92499 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.43■□□□□ 0.38
DDX1Q92499 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DDX1Q92499 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 AC002056.1-201ENST00000395613 760 ntBASIC17.43■□□□□ 0.38
DDX1Q92499 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.43■□□□□ 0.38
DDX1Q92499 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX1Q92499 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.43■□□□□ 0.38
DDX1Q92499 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX1Q92499 RNA5SP421-201ENST00000516864 134 ntBASIC17.43■□□□□ 0.38
DDX1Q92499 AC025678.2-201ENST00000562061 970 ntBASIC17.43■□□□□ 0.38
DDX1Q92499 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.43■□□□□ 0.38
DDX1Q92499 AL161645.1-201ENST00000622716 1255 ntBASIC17.43■□□□□ 0.38
DDX1Q92499 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX1Q92499 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.43■□□□□ 0.38
DDX1Q92499 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.43■□□□□ 0.38
DDX1Q92499 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 CDC14C-201ENST00000428251 1719 ntBASIC17.43■□□□□ 0.38
DDX1Q92499 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX1Q92499 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.43■□□□□ 0.38
DDX1Q92499 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
DDX1Q92499 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
DDX1Q92499 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 AC112504.1-201ENST00000623415 1841 ntBASIC17.42■□□□□ 0.38
DDX1Q92499 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.42■□□□□ 0.38
DDX1Q92499 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX1Q92499 AC008894.3-201ENST00000624324 3103 ntBASIC17.42■□□□□ 0.38
DDX1Q92499 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DDX1Q92499 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DDX1Q92499 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DDX1Q92499 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.42■□□□□ 0.38
DDX1Q92499 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.42■□□□□ 0.38
DDX1Q92499 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX1Q92499 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.42■□□□□ 0.38
DDX1Q92499 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX1Q92499 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX1Q92499 AC093512.1-201ENST00000617969 520 ntBASIC17.42■□□□□ 0.38
DDX1Q92499 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.42■□□□□ 0.38
DDX1Q92499 AF228730.6-201ENST00000641497 218 ntBASIC17.42■□□□□ 0.38
DDX1Q92499 AC084121.3-201ENST00000641716 218 ntBASIC17.42■□□□□ 0.38
DDX1Q92499 AC105233.6-201ENST00000642093 218 ntBASIC17.42■□□□□ 0.38
DDX1Q92499 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
DDX1Q92499 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DDX1Q92499 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DDX1Q92499 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DDX1Q92499 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
DDX1Q92499 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX1Q92499 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX1Q92499 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX1Q92499 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.41■□□□□ 0.38
DDX1Q92499 AC069224.1-201ENST00000566372 1715 ntBASIC17.41■□□□□ 0.38
DDX1Q92499 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX1Q92499 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX1Q92499 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX1Q92499 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
DDX1Q92499 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX1Q92499 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX1Q92499 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms