Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHROOM3Q8TF72 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 CEND1P1-201ENST00000451006 455 ntBASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 AC008267.7-201ENST00000624570 1194 ntBASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 U82695.1-201ENST00000635752 1889 ntBASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 AC008741.2-201ENST00000612792 3115 ntBASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 HLA-V-201ENST00000429037 534 ntBASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 AL592309.1-201ENST00000443127 649 ntBASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SHROOM3Q8TF72 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 AC010491.1-201ENST00000563101 2797 ntBASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 LINC01144-201ENST00000626198 1710 ntBASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 AC005034.1-201ENST00000426657 489 ntBASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 AC004449.1-201ENST00000564240 433 ntBASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 MIR4321-201ENST00000592276 80 ntBASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 AC009093.7-201ENST00000623853 1223 ntBASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 AP3S2-216ENST00000617003 1561 ntBASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM3Q8TF72 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.66■□□□□ 0.26
SHROOM3Q8TF72 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM3Q8TF72 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms