Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 BANF1P1-201ENST00000553684 263 ntBASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 LINC01144-201ENST00000626198 1710 ntBASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-3Q8TAU0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 AC241585.1-201ENST00000433527 519 ntBASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 AC245100.3-201ENST00000441281 285 ntBASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 AC105233.2-201ENST00000523697 349 ntBASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 AF228730.5-201ENST00000530288 346 ntBASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-3Q8TAU0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 ALG1L8P-201ENST00000533887 760 ntBASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 AC004233.3-201ENST00000607794 1269 ntBASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NKX2-3Q8TAU0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms