Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TMEM35BQ8NCS4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM35BQ8NCS4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM35BQ8NCS4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM35BQ8NCS4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM35BQ8NCS4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM35BQ8NCS4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM35BQ8NCS4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TMEM35BQ8NCS4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TMEM35BQ8NCS4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 AC073439.1-201ENST00000624121 1774 ntBASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 AC004832.2-201ENST00000426397 482 ntBASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 FAM58CP-201ENST00000435741 640 ntBASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 RARRES2P8-201ENST00000566335 367 ntBASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TMEM35BQ8NCS4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 AL671883.3-201ENST00000603274 991 ntBASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 AKAP8P1-201ENST00000434743 1349 ntBASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM35BQ8NCS4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 AL671277.1-201ENST00000429656 993 ntBASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 PRYP6-201ENST00000514804 343 ntBASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM35BQ8NCS4 AC092902.6-201ENST00000641783 218 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms