Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 KLF2P4-201ENST00000451959 1225 ntBASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 PTP4A1P2-201ENST00000546033 454 ntBASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDC42BPAQ5VT25 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 MGST3-203ENST00000367885 680 ntTSL 2 BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 AC107373.2-201ENST00000607735 490 ntBASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC24.34■■□□□ 1.49
CDC42BPAQ5VT25 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 REXO1L8P-201ENST00000604378 1897 ntBASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 ZBTB45P2-201ENST00000452245 1531 ntBASIC24.33■■□□□ 1.49
CDC42BPAQ5VT25 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC24.33■■□□□ 1.48
CDC42BPAQ5VT25 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC24.33■■□□□ 1.48
CDC42BPAQ5VT25 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC24.33■■□□□ 1.48
CDC42BPAQ5VT25 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 AL355864.2-201ENST00000447420 863 ntBASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 VDAC1P7-201ENST00000462417 847 ntBASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 KRT8P44-201ENST00000441609 1350 ntBASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 NF2-208ENST00000403435 2568 ntTSL 5 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 BCYRN1-201ENST00000418539 200 ntBASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 FO681548.1-201ENST00000455617 1132 ntBASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 AP001889.1-201ENST00000525414 633 ntBASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 FAM8A2P-201ENST00000528813 1142 ntBASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 MIR6787-201ENST00000616675 61 ntBASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 CEP83-AS1-201ENST00000623122 2482 ntBASIC24.32■■□□□ 1.48
CDC42BPAQ5VT25 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 AMT-233ENST00000636522 1620 ntTSL 2 BASIC24.31■■□□□ 1.48
CDC42BPAQ5VT25 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 AC018470.1-201ENST00000624790 3129 ntBASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms