Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 BANF1P1-201ENST00000553684 263 ntBASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTC1Q2NKJ3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 AL133215.2-201ENST00000609242 977 ntBASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTC1Q2NKJ3 AC060834.1-201ENST00000443027 2032 ntBASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 AL080243.2-201ENST00000418783 582 ntBASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 MTND6P24-201ENST00000440466 518 ntBASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 AC092658.1-201ENST00000505836 891 ntBASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 AC093004.1-201ENST00000508850 424 ntBASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 WASH4P-201ENST00000564273 1246 ntBASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 AC008494.3-201ENST00000606615 944 ntBASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 AC004790.1-201ENST00000612686 536 ntBASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTC1Q2NKJ3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms