Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 TERF1P3-201ENST00000505638 1227 ntBASIC19.72■□□□□ 0.75
RFX7Q2KHR2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 AL513523.2-202ENST00000427283 2040 ntBASIC19.72■□□□□ 0.75
RFX7Q2KHR2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 AL596087.1-201ENST00000400979 1969 ntBASIC19.72■□□□□ 0.75
RFX7Q2KHR2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX7Q2KHR2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 AC241585.1-201ENST00000433527 519 ntBASIC19.71■□□□□ 0.75
RFX7Q2KHR2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 AC061975.2-201ENST00000581722 295 ntBASIC19.71■□□□□ 0.75
RFX7Q2KHR2 AL138828.2-201ENST00000615812 383 ntBASIC19.71■□□□□ 0.75
RFX7Q2KHR2 AF228730.6-201ENST00000641497 218 ntBASIC19.71■□□□□ 0.75
RFX7Q2KHR2 AC084121.3-201ENST00000641716 218 ntBASIC19.71■□□□□ 0.75
RFX7Q2KHR2 AC105233.6-201ENST00000642093 218 ntBASIC19.71■□□□□ 0.75
RFX7Q2KHR2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 AC026691.1-201ENST00000602502 2017 ntBASIC19.71■□□□□ 0.75
RFX7Q2KHR2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 AC092364.2-201ENST00000596710 2692 ntBASIC19.71■□□□□ 0.75
RFX7Q2KHR2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX7Q2KHR2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.7■□□□□ 0.74
RFX7Q2KHR2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 AC015922.1-201ENST00000421102 1152 ntBASIC19.7■□□□□ 0.74
RFX7Q2KHR2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 HLA-V-204ENST00000476601 1289 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms