Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
NKX6-1P78426 HCG4-201ENST00000418983 998 ntBASIC14.53□□□□□ -0.08
NKX6-1P78426 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.53□□□□□ -0.08
NKX6-1P78426 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX6-1P78426 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.53□□□□□ -0.08
NKX6-1P78426 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NKX6-1P78426 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.53□□□□□ -0.08
NKX6-1P78426 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.53□□□□□ -0.08
NKX6-1P78426 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.53□□□□□ -0.08
NKX6-1P78426 AC087641.1-201ENST00000557561 1021 ntBASIC14.53□□□□□ -0.08
NKX6-1P78426 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX6-1P78426 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.53□□□□□ -0.08
NKX6-1P78426 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.53□□□□□ -0.08
NKX6-1P78426 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NKX6-1P78426 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.53□□□□□ -0.08
NKX6-1P78426 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NKX6-1P78426 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.53□□□□□ -0.08
NKX6-1P78426 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-1P78426 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.52□□□□□ -0.08
NKX6-1P78426 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-1P78426 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NKX6-1P78426 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-1P78426 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.52□□□□□ -0.08
NKX6-1P78426 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NKX6-1P78426 SLC22A20-204ENST00000530038 1673 ntBASIC14.52□□□□□ -0.08
NKX6-1P78426 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
NKX6-1P78426 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
NKX6-1P78426 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-1P78426 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-1P78426 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.52□□□□□ -0.08
NKX6-1P78426 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.52□□□□□ -0.08
NKX6-1P78426 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.52□□□□□ -0.08
NKX6-1P78426 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-1P78426 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.52□□□□□ -0.08
NKX6-1P78426 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
NKX6-1P78426 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NKX6-1P78426 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-1P78426 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.52□□□□□ -0.08
NKX6-1P78426 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.52□□□□□ -0.08
NKX6-1P78426 TUBB8P12-201ENST00000308911 1335 ntBASIC14.52□□□□□ -0.08
NKX6-1P78426 TUBB7P-202ENST00000428444 1305 ntBASIC14.52□□□□□ -0.08
NKX6-1P78426 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-1P78426 TUBB8P7-204ENST00000567960 1332 ntBASIC14.52□□□□□ -0.08
NKX6-1P78426 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-1P78426 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NKX6-1P78426 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 AC236430.1-201ENST00000402231 743 ntBASIC14.52□□□□□ -0.09
NKX6-1P78426 AC055876.3-201ENST00000431496 288 ntBASIC14.52□□□□□ -0.09
NKX6-1P78426 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX6-1P78426 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX6-1P78426 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX6-1P78426 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
NKX6-1P78426 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.52□□□□□ -0.09
NKX6-1P78426 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.52□□□□□ -0.09
NKX6-1P78426 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX6-1P78426 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.52□□□□□ -0.09
NKX6-1P78426 MPDU1-223ENST00000582151 728 ntBASIC14.52□□□□□ -0.09
NKX6-1P78426 AC012645.4-201ENST00000610691 1061 ntBASIC14.52□□□□□ -0.09
NKX6-1P78426 AC138649.4-201ENST00000612222 287 ntBASIC14.52□□□□□ -0.09
NKX6-1P78426 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.52□□□□□ -0.09
NKX6-1P78426 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.52□□□□□ -0.09
NKX6-1P78426 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
NKX6-1P78426 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
NKX6-1P78426 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.52□□□□□ -0.09
NKX6-1P78426 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NKX6-1P78426 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
NKX6-1P78426 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NKX6-1P78426 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.52□□□□□ -0.09
NKX6-1P78426 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NKX6-1P78426 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-1P78426 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-1P78426 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-1P78426 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-1P78426 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX6-1P78426 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX6-1P78426 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms