Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
WNT3AP56704 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
WNT3AP56704 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.58■□□□□ 0.25
WNT3AP56704 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
WNT3AP56704 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
WNT3AP56704 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
WNT3AP56704 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.58■□□□□ 0.25
WNT3AP56704 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
WNT3AP56704 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
WNT3AP56704 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
WNT3AP56704 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.58■□□□□ 0.24
WNT3AP56704 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 TFAMP1-201ENST00000412727 736 ntBASIC16.58■□□□□ 0.24
WNT3AP56704 PRYP6-201ENST00000514804 343 ntBASIC16.58■□□□□ 0.24
WNT3AP56704 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.58■□□□□ 0.24
WNT3AP56704 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
WNT3AP56704 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.58■□□□□ 0.24
WNT3AP56704 AL138918.1-201ENST00000568306 659 ntBASIC16.58■□□□□ 0.24
WNT3AP56704 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.58■□□□□ 0.24
WNT3AP56704 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
WNT3AP56704 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.58■□□□□ 0.24
WNT3AP56704 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
WNT3AP56704 AKAP8P1-201ENST00000434743 1349 ntBASIC16.58■□□□□ 0.24
WNT3AP56704 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.58■□□□□ 0.24
WNT3AP56704 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
WNT3AP56704 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.58■□□□□ 0.24
WNT3AP56704 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
WNT3AP56704 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
WNT3AP56704 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.58■□□□□ 0.24
WNT3AP56704 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.58■□□□□ 0.24
WNT3AP56704 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.58■□□□□ 0.24
WNT3AP56704 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.58■□□□□ 0.24
WNT3AP56704 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
WNT3AP56704 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
WNT3AP56704 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
WNT3AP56704 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
WNT3AP56704 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.57■□□□□ 0.24
WNT3AP56704 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.57■□□□□ 0.24
WNT3AP56704 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.57■□□□□ 0.24
WNT3AP56704 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
WNT3AP56704 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
WNT3AP56704 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.57■□□□□ 0.24
WNT3AP56704 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.57■□□□□ 0.24
WNT3AP56704 ADH5P3-201ENST00000433842 1137 ntBASIC16.57■□□□□ 0.24
WNT3AP56704 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.57■□□□□ 0.24
WNT3AP56704 AL135744.1-201ENST00000565098 629 ntBASIC16.57■□□□□ 0.24
WNT3AP56704 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.57■□□□□ 0.24
WNT3AP56704 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.57■□□□□ 0.24
WNT3AP56704 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
WNT3AP56704 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
WNT3AP56704 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.57■□□□□ 0.24
WNT3AP56704 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
WNT3AP56704 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
WNT3AP56704 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.56■□□□□ 0.24
WNT3AP56704 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
WNT3AP56704 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.56■□□□□ 0.24
WNT3AP56704 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.56■□□□□ 0.24
WNT3AP56704 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.56■□□□□ 0.24
WNT3AP56704 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms