Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP6P35125 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
USP6P35125 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP6P35125 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP6P35125 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
USP6P35125 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
USP6P35125 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC21.82■■□□□ 1.08
USP6P35125 AL162726.2-201ENST00000438986 1017 ntBASIC21.82■■□□□ 1.08
USP6P35125 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.82■■□□□ 1.08
USP6P35125 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC21.82■■□□□ 1.08
USP6P35125 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
USP6P35125 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
USP6P35125 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.82■■□□□ 1.08
USP6P35125 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP6P35125 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
USP6P35125 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP6P35125 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.82■■□□□ 1.08
USP6P35125 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.82■■□□□ 1.08
USP6P35125 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.82■■□□□ 1.08
USP6P35125 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.82■■□□□ 1.08
USP6P35125 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.82■■□□□ 1.08
USP6P35125 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP6P35125 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.82■■□□□ 1.08
USP6P35125 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP6P35125 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
USP6P35125 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.82■■□□□ 1.08
USP6P35125 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.81■■□□□ 1.08
USP6P35125 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP6P35125 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP6P35125 BOLA2P3-201ENST00000404566 256 ntBASIC21.81■■□□□ 1.08
USP6P35125 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.81■■□□□ 1.08
USP6P35125 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.81■■□□□ 1.08
USP6P35125 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.81■■□□□ 1.08
USP6P35125 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.81■■□□□ 1.08
USP6P35125 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.81■■□□□ 1.08
USP6P35125 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
USP6P35125 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.81■■□□□ 1.08
USP6P35125 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
USP6P35125 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.81■■□□□ 1.08
USP6P35125 AC124283.3-201ENST00000570869 594 ntBASIC21.81■■□□□ 1.08
USP6P35125 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.81■■□□□ 1.08
USP6P35125 AC233724.13-201ENST00000598383 410 ntBASIC21.81■■□□□ 1.08
USP6P35125 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.81■■□□□ 1.08
USP6P35125 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP6P35125 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP6P35125 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.81■■□□□ 1.08
USP6P35125 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.81■■□□□ 1.08
USP6P35125 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
USP6P35125 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
USP6P35125 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
USP6P35125 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
USP6P35125 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.81■■□□□ 1.08
USP6P35125 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP6P35125 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP6P35125 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.81■■□□□ 1.08
USP6P35125 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.81■■□□□ 1.08
USP6P35125 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP6P35125 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.81■■□□□ 1.08
USP6P35125 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP6P35125 KRT18P64-201ENST00000434946 1219 ntBASIC21.8■■□□□ 1.08
USP6P35125 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.8■■□□□ 1.08
USP6P35125 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
USP6P35125 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC21.8■■□□□ 1.08
USP6P35125 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.8■■□□□ 1.08
USP6P35125 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC21.8■■□□□ 1.08
USP6P35125 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.8■■□□□ 1.08
USP6P35125 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.8■■□□□ 1.08
USP6P35125 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
USP6P35125 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
USP6P35125 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.8■■□□□ 1.08
USP6P35125 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.8■■□□□ 1.08
USP6P35125 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
USP6P35125 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
USP6P35125 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
USP6P35125 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.8■■□□□ 1.08
USP6P35125 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.8■■□□□ 1.08
USP6P35125 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
USP6P35125 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.8■■□□□ 1.08
USP6P35125 BNIP3P42-201ENST00000454982 569 ntBASIC21.8■■□□□ 1.08
USP6P35125 HNRNPA1P13-201ENST00000510646 963 ntBASIC21.8■■□□□ 1.08
USP6P35125 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.8■■□□□ 1.08
USP6P35125 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.8■■□□□ 1.08
USP6P35125 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.8■■□□□ 1.08
USP6P35125 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.8■■□□□ 1.08
USP6P35125 BNIP3P29-201ENST00000598302 571 ntBASIC21.8■■□□□ 1.08
USP6P35125 AC133552.6-201ENST00000613406 534 ntBASIC21.8■■□□□ 1.08
USP6P35125 AC011447.5-201ENST00000616168 564 ntBASIC21.8■■□□□ 1.08
USP6P35125 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms