Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CTGFP29279 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CTGFP29279 AL691432.1-201ENST00000596308 1422 ntBASIC18.21■□□□□ 0.51
CTGFP29279 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CTGFP29279 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.21■□□□□ 0.51
CTGFP29279 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CTGFP29279 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.21■□□□□ 0.5
CTGFP29279 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.2■□□□□ 0.5
CTGFP29279 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.2■□□□□ 0.5
CTGFP29279 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CTGFP29279 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.2■□□□□ 0.5
CTGFP29279 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.2■□□□□ 0.5
CTGFP29279 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
CTGFP29279 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.2■□□□□ 0.5
CTGFP29279 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CTGFP29279 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.2■□□□□ 0.5
CTGFP29279 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 RN7SL190P-201ENST00000582519 257 ntBASIC18.2■□□□□ 0.5
CTGFP29279 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.2■□□□□ 0.5
CTGFP29279 RHOXF1P1-202ENST00000635473 501 ntBASIC18.2■□□□□ 0.5
CTGFP29279 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.2■□□□□ 0.5
CTGFP29279 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 PCGF3-213ENST00000620529 1899 ntBASIC18.2■□□□□ 0.5
CTGFP29279 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.2■□□□□ 0.5
CTGFP29279 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTGFP29279 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.19■□□□□ 0.5
CTGFP29279 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CTGFP29279 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 C1QBPP1-201ENST00000400117 770 ntBASIC18.19■□□□□ 0.5
CTGFP29279 MIR663B-201ENST00000408361 115 ntBASIC18.19■□□□□ 0.5
CTGFP29279 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.19■□□□□ 0.5
CTGFP29279 SLC25A24P2-201ENST00000415059 510 ntBASIC18.19■□□□□ 0.5
CTGFP29279 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.19■□□□□ 0.5
CTGFP29279 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.19■□□□□ 0.5
CTGFP29279 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 KRT8P37-201ENST00000451609 1420 ntBASIC18.19■□□□□ 0.5
CTGFP29279 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 VDAC1P7-201ENST00000462417 847 ntBASIC18.19■□□□□ 0.5
CTGFP29279 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.19■□□□□ 0.5
CTGFP29279 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.19■□□□□ 0.5
CTGFP29279 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.19■□□□□ 0.5
CTGFP29279 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.19■□□□□ 0.5
CTGFP29279 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.19■□□□□ 0.5
CTGFP29279 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.19■□□□□ 0.5
CTGFP29279 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.19■□□□□ 0.5
CTGFP29279 AL603756.1-201ENST00000606511 2163 ntBASIC18.19■□□□□ 0.5
CTGFP29279 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.19■□□□□ 0.5
CTGFP29279 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.19■□□□□ 0.5
CTGFP29279 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTGFP29279 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.18■□□□□ 0.5
CTGFP29279 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTGFP29279 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTGFP29279 AL607033.1-201ENST00000623900 1599 ntBASIC18.18■□□□□ 0.5
CTGFP29279 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTGFP29279 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CTGFP29279 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTGFP29279 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CTGFP29279 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.18■□□□□ 0.5
CTGFP29279 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTGFP29279 TOMM22P5-201ENST00000416399 439 ntBASIC18.18■□□□□ 0.5
CTGFP29279 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.18■□□□□ 0.5
CTGFP29279 CALR4P-201ENST00000431943 946 ntBASIC18.18■□□□□ 0.5
CTGFP29279 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTGFP29279 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTGFP29279 AC079316.1-201ENST00000548397 411 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms