Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.24■□□□□ 0.35
Hoxc9P09633 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.24■□□□□ 0.35
Hoxc9P09633 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Hoxc9P09633 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hoxc9P09633 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.23■□□□□ 0.35
Hoxc9P09633 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.23■□□□□ 0.35
Hoxc9P09633 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Hoxc9P09633 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Gm10434-201ENSMUST00000101158 471 ntBASIC17.23■□□□□ 0.35
Hoxc9P09633 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC17.23■□□□□ 0.35
Hoxc9P09633 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.23■□□□□ 0.35
Hoxc9P09633 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC17.23■□□□□ 0.35
Hoxc9P09633 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC17.23■□□□□ 0.35
Hoxc9P09633 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Gm30285-201ENSMUST00000214614 422 ntBASIC17.23■□□□□ 0.35
Hoxc9P09633 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC17.23■□□□□ 0.35
Hoxc9P09633 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc9P09633 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Hoxc9P09633 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC17.22■□□□□ 0.35
Hoxc9P09633 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hoxc9P09633 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.22■□□□□ 0.35
Hoxc9P09633 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hoxc9P09633 Gm12997-201ENSMUST00000120207 640 ntBASIC17.22■□□□□ 0.35
Hoxc9P09633 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Hoxc9P09633 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC17.22■□□□□ 0.35
Hoxc9P09633 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC17.22■□□□□ 0.35
Hoxc9P09633 Gm44772-201ENSMUST00000207623 1191 ntBASIC17.22■□□□□ 0.35
Hoxc9P09633 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hoxc9P09633 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hoxc9P09633 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.22■□□□□ 0.35
Hoxc9P09633 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc9P09633 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hoxc9P09633 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hoxc9P09633 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hoxc9P09633 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hoxc9P09633 Gm14726-201ENSMUST00000120623 896 ntBASIC17.21■□□□□ 0.35
Hoxc9P09633 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hoxc9P09633 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC17.21■□□□□ 0.35
Hoxc9P09633 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC17.21■□□□□ 0.35
Hoxc9P09633 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC17.21■□□□□ 0.35
Hoxc9P09633 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC17.21■□□□□ 0.35
Hoxc9P09633 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hoxc9P09633 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.21■□□□□ 0.35
Hoxc9P09633 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms