Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 KRT8P49-201ENST00000604166 1432 ntBASIC14.8□□□□□ -0.04
SPTA1P02549 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.8□□□□□ -0.04
SPTA1P02549 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 AC005229.1-201ENST00000392885 409 ntBASIC14.8□□□□□ -0.04
SPTA1P02549 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.8□□□□□ -0.04
SPTA1P02549 MIR3615-201ENST00000581999 87 ntBASIC14.8□□□□□ -0.04
SPTA1P02549 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.8□□□□□ -0.04
SPTA1P02549 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.8□□□□□ -0.04
SPTA1P02549 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.8□□□□□ -0.04
SPTA1P02549 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SPTA1P02549 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 KRT8P22-201ENST00000562317 1415 ntBASIC14.8□□□□□ -0.04
SPTA1P02549 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.8□□□□□ -0.04
SPTA1P02549 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.8□□□□□ -0.04
SPTA1P02549 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SPTA1P02549 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.8□□□□□ -0.04
SPTA1P02549 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.8□□□□□ -0.04
SPTA1P02549 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SPTA1P02549 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPTA1P02549 CSF2RBP1-201ENST00000447905 391 ntBASIC14.8□□□□□ -0.04
SPTA1P02549 RARRES2P5-201ENST00000564013 466 ntBASIC14.8□□□□□ -0.04
SPTA1P02549 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.8□□□□□ -0.04
SPTA1P02549 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.8□□□□□ -0.04
SPTA1P02549 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.79□□□□□ -0.04
SPTA1P02549 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.79□□□□□ -0.04
SPTA1P02549 ABALON-201ENST00000629058 1903 ntBASIC14.79□□□□□ -0.04
SPTA1P02549 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.79□□□□□ -0.04
SPTA1P02549 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.79□□□□□ -0.04
SPTA1P02549 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.79□□□□□ -0.04
SPTA1P02549 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
SPTA1P02549 AC079316.1-201ENST00000548397 411 ntBASIC14.79□□□□□ -0.04
SPTA1P02549 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.79□□□□□ -0.04
SPTA1P02549 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SPTA1P02549 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.79□□□□□ -0.04
SPTA1P02549 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.79□□□□□ -0.04
SPTA1P02549 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.79□□□□□ -0.04
SPTA1P02549 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 AC092978.1-202ENST00000637590 1327 ntBASIC14.79□□□□□ -0.04
SPTA1P02549 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
SPTA1P02549 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SPTA1P02549 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SPTA1P02549 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.79□□□□□ -0.04
SPTA1P02549 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPTA1P02549 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.79□□□□□ -0.04
SPTA1P02549 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.79□□□□□ -0.04
SPTA1P02549 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SPTA1P02549 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SPTA1P02549 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPTA1P02549 YBX1P6-201ENST00000442962 1002 ntBASIC14.78□□□□□ -0.04
SPTA1P02549 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.78□□□□□ -0.04
SPTA1P02549 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms