Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SIX6O95475 AC113410.3-201ENST00000623366 203 ntBASIC13.8□□□□□ -0.2
SIX6O95475 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.8□□□□□ -0.2
SIX6O95475 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SIX6O95475 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SIX6O95475 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.79□□□□□ -0.2
SIX6O95475 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SIX6O95475 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.79□□□□□ -0.2
SIX6O95475 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.79□□□□□ -0.2
SIX6O95475 AL512652.2-201ENST00000625156 1716 ntBASIC13.79□□□□□ -0.2
SIX6O95475 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SIX6O95475 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.79□□□□□ -0.2
SIX6O95475 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.79□□□□□ -0.2
SIX6O95475 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 AC107918.4-201ENST00000641966 3141 ntBASIC13.79□□□□□ -0.2
SIX6O95475 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SIX6O95475 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.79□□□□□ -0.2
SIX6O95475 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.79□□□□□ -0.2
SIX6O95475 ECEL1P2-202ENST00000465689 757 ntBASIC13.79□□□□□ -0.2
SIX6O95475 AC107956.1-201ENST00000494359 873 ntBASIC13.79□□□□□ -0.2
SIX6O95475 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.79□□□□□ -0.2
SIX6O95475 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.79□□□□□ -0.2
SIX6O95475 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.79□□□□□ -0.2
SIX6O95475 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.79□□□□□ -0.2
SIX6O95475 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
SIX6O95475 AC013467.2-201ENST00000605472 835 ntBASIC13.79□□□□□ -0.2
SIX6O95475 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.79□□□□□ -0.2
SIX6O95475 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.79□□□□□ -0.2
SIX6O95475 LINC00552-201ENST00000625151 2579 ntBASIC13.79□□□□□ -0.2
SIX6O95475 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SIX6O95475 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 AL031731.1-201ENST00000642131 2094 ntBASIC13.79□□□□□ -0.2
SIX6O95475 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SIX6O95475 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SIX6O95475 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
SIX6O95475 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.79□□□□□ -0.2
SIX6O95475 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SIX6O95475 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.79□□□□□ -0.2
SIX6O95475 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIX6O95475 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SIX6O95475 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SIX6O95475 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 AC091951.1-201ENST00000512854 2465 ntBASIC13.78□□□□□ -0.2
SIX6O95475 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.78□□□□□ -0.2
SIX6O95475 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIX6O95475 ABHD17AP1-201ENST00000358206 933 ntBASIC13.78□□□□□ -0.2
SIX6O95475 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SIX6O95475 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SIX6O95475 IGHGP-201ENST00000390555 1178 ntBASIC13.78□□□□□ -0.2
SIX6O95475 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.78□□□□□ -0.2
SIX6O95475 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.78□□□□□ -0.2
SIX6O95475 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms