Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC3O60481 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ZIC3O60481 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
ZIC3O60481 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ZIC3O60481 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.73□□□□□ -0.05
ZIC3O60481 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC3O60481 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.73□□□□□ -0.05
ZIC3O60481 KLF2P3-201ENST00000451977 1087 ntBASIC14.73□□□□□ -0.05
ZIC3O60481 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.73□□□□□ -0.05
ZIC3O60481 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.73□□□□□ -0.05
ZIC3O60481 DUX4L27-201ENST00000554796 1261 ntBASIC14.73□□□□□ -0.05
ZIC3O60481 AL365330.1-201ENST00000607459 531 ntBASIC14.73□□□□□ -0.05
ZIC3O60481 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC3O60481 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC3O60481 AC007967.4-201ENST00000614700 386 ntBASIC14.73□□□□□ -0.05
ZIC3O60481 AC093512.1-201ENST00000617969 520 ntBASIC14.73□□□□□ -0.05
ZIC3O60481 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.73□□□□□ -0.05
ZIC3O60481 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.73□□□□□ -0.05
ZIC3O60481 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ZIC3O60481 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC3O60481 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.73□□□□□ -0.05
ZIC3O60481 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC3O60481 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.73□□□□□ -0.05
ZIC3O60481 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
ZIC3O60481 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZIC3O60481 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.73□□□□□ -0.05
ZIC3O60481 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ZIC3O60481 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.72□□□□□ -0.05
ZIC3O60481 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.72□□□□□ -0.05
ZIC3O60481 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.72□□□□□ -0.05
ZIC3O60481 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 AC079328.2-201ENST00000561241 3354 ntBASIC14.72□□□□□ -0.05
ZIC3O60481 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ZIC3O60481 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.72□□□□□ -0.05
ZIC3O60481 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
ZIC3O60481 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.72□□□□□ -0.05
ZIC3O60481 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.72□□□□□ -0.05
ZIC3O60481 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.72□□□□□ -0.05
ZIC3O60481 MIR4321-201ENST00000592276 80 ntBASIC14.72□□□□□ -0.05
ZIC3O60481 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ZIC3O60481 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ZIC3O60481 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ZIC3O60481 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.72□□□□□ -0.05
ZIC3O60481 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ZIC3O60481 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.72□□□□□ -0.05
ZIC3O60481 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.72□□□□□ -0.05
ZIC3O60481 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ZIC3O60481 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
ZIC3O60481 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.71□□□□□ -0.05
ZIC3O60481 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC3O60481 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC3O60481 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC3O60481 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC3O60481 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC3O60481 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
ZIC3O60481 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC3O60481 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC3O60481 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.71□□□□□ -0.05
ZIC3O60481 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC3O60481 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC3O60481 AL353705.2-201ENST00000428243 662 ntBASIC14.71□□□□□ -0.05
ZIC3O60481 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.71□□□□□ -0.05
ZIC3O60481 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC3O60481 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.71□□□□□ -0.05
ZIC3O60481 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.71□□□□□ -0.05
ZIC3O60481 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.71□□□□□ -0.05
ZIC3O60481 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.71□□□□□ -0.05
ZIC3O60481 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.71□□□□□ -0.05
ZIC3O60481 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC3O60481 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ZIC3O60481 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.71□□□□□ -0.05
ZIC3O60481 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ZIC3O60481 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ZIC3O60481 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms