Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSNK1G3Q9Y6M4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 AC244107.1-201ENST00000442033 332 ntBASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 RNA5SP410-201ENST00000516285 106 ntBASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 AL589739.1-201ENST00000607720 493 ntBASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 AC020765.3-201ENST00000613051 740 ntBASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSNK1G3Q9Y6M4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 GAPDHP21-201ENST00000450301 1010 ntBASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 AC009477.1-201ENST00000452936 217 ntBASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 AC105021.1-202ENST00000570572 669 ntBASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 SPDYE22P-201ENST00000582158 798 ntBASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 TEX28P1-201ENST00000613479 1221 ntBASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 TEX28P2-201ENST00000617764 1221 ntBASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1G3Q9Y6M4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CSNK1G3Q9Y6M4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms