Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC100756.1-201ENST00000562736 682 ntBASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 AC138749.3-201ENST00000567691 622 ntBASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 AC116165.1-201ENST00000611806 668 ntBASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HOXC10Q9NYD6 GGT3P-204ENST00000453783 1664 ntBASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 MYCLP2-201ENST00000449268 967 ntBASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 TIMM17BP1-201ENST00000545713 516 ntBASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 AC092337.1-201ENST00000568699 1129 ntBASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 AC132938.2-201ENST00000579188 680 ntBASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 AL591163.1-201ENST00000641757 987 ntBASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC10Q9NYD6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 PKD1P1-201ENST00000458669 6805 ntBASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 AL162274.1-201ENST00000617191 1098 ntBASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 AL136982.4-201ENST00000437689 1740 ntBASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC10Q9NYD6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC10Q9NYD6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC10Q9NYD6 CYP4F24P-201ENST00000586049 1580 ntBASIC18.64■□□□□ 0.58
HOXC10Q9NYD6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC10Q9NYD6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC10Q9NYD6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC10Q9NYD6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC10Q9NYD6 AL645608.8-201ENST00000606034 2086 ntBASIC18.64■□□□□ 0.57
HOXC10Q9NYD6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC10Q9NYD6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms