Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 TSSC2-201ENST00000450217 709 ntBASIC20.26■□□□□ 0.83
UPF2Q9HAU5 DUX4L26-201ENST00000489078 1255 ntBASIC20.26■□□□□ 0.83
UPF2Q9HAU5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 CDC14C-201ENST00000428251 1719 ntBASIC20.26■□□□□ 0.83
UPF2Q9HAU5 AC022532.1-201ENST00000624563 1728 ntBASIC20.26■□□□□ 0.83
UPF2Q9HAU5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.26■□□□□ 0.83
UPF2Q9HAU5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 MIR4492-201ENST00000581627 80 ntBASIC20.25■□□□□ 0.83
UPF2Q9HAU5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPF2Q9HAU5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 OR2I1P-209ENST00000641730 5365 ntBASIC20.24■□□□□ 0.83
UPF2Q9HAU5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.24■□□□□ 0.83
UPF2Q9HAU5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 TPSP2-201ENST00000561760 610 ntBASIC20.24■□□□□ 0.83
UPF2Q9HAU5 AC091167.2-201ENST00000579581 588 ntBASIC20.24■□□□□ 0.83
UPF2Q9HAU5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 AL121956.5-201ENST00000625261 221 ntBASIC20.24■□□□□ 0.83
UPF2Q9HAU5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UPF2Q9HAU5 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms