Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 PMPCAP1-201ENST00000508114 1576 ntBASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMIM4Q8WVI0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM4Q8WVI0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.08□□□□□ -0.15
SMIM4Q8WVI0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SMIM4Q8WVI0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.08□□□□□ -0.15
SMIM4Q8WVI0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
SMIM4Q8WVI0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 GRK6P1-201ENST00000400595 1711 ntBASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 AC124864.1-201ENST00000623408 392 ntBASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 AP003680.1-201ENST00000598970 3660 ntBASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 KRT18P22-201ENST00000402024 1347 ntBASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 LINC01568-207ENST00000641790 1380 ntBASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM4Q8WVI0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 CICP23-201ENST00000605013 2741 ntBASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 AL359258.3-201ENST00000622910 2331 ntBASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 AL592424.1-201ENST00000563624 1536 ntBASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms