Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
SynpoQ8CC35 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SynpoQ8CC35 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SynpoQ8CC35 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SynpoQ8CC35 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SynpoQ8CC35 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.02□□□□□ -0.32
SynpoQ8CC35 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SynpoQ8CC35 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SynpoQ8CC35 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SynpoQ8CC35 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SynpoQ8CC35 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SynpoQ8CC35 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SynpoQ8CC35 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.02□□□□□ -0.32
SynpoQ8CC35 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.02□□□□□ -0.33
SynpoQ8CC35 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.02□□□□□ -0.33
SynpoQ8CC35 Gm37714-201ENSMUST00000194742 342 ntBASIC13.02□□□□□ -0.33
SynpoQ8CC35 Gm43438-201ENSMUST00000198133 379 ntBASIC13.02□□□□□ -0.33
SynpoQ8CC35 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SynpoQ8CC35 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Gm5279-201ENSMUST00000199575 745 ntBASIC13.01□□□□□ -0.33
SynpoQ8CC35 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
SynpoQ8CC35 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13□□□□□ -0.33
SynpoQ8CC35 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SynpoQ8CC35 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13□□□□□ -0.33
SynpoQ8CC35 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13□□□□□ -0.33
SynpoQ8CC35 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13□□□□□ -0.33
SynpoQ8CC35 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13□□□□□ -0.33
SynpoQ8CC35 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13□□□□□ -0.33
SynpoQ8CC35 Gm18027-201ENSMUST00000218947 619 ntBASIC13□□□□□ -0.33
SynpoQ8CC35 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13□□□□□ -0.33
SynpoQ8CC35 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SynpoQ8CC35 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Gm6198-201ENSMUST00000191337 2929 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms